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Biostatistics for academic and pragmatic clinical trials

Statistical design and analysis of trials, from the sample size calculation to the final report

What it is

Complete biostatistical support for academic, pragmatic and implementation clinical trials: sizing the study, writing the statistical analysis plan, analysing efficacy and safety, and preparing the results for publication.

A methodology that follows the ICH E9 structure, adapted to the actual design of the study and to the research question, not to a default template.

Objectives

  • Size the study with a sample size justified by the clinically relevant effect and the desired statistical power.
  • Specify the analysis plan before seeing the data, setting the populations, endpoints and multiplicity strategy.
  • Analyse the primary and secondary endpoints with methods suited to the design and to the structure of the data.
  • Deliver interpreted results ready for scientific publication or the end-of-study report.
Key points

Study design and sizing

  • Sample size calculation for parallel, factorial and cluster-randomised designs.
  • Randomisation strategies and allowance for expected dropout rates.
  • Assessment of the statistical feasibility of the design before recruitment starts.

Statistical analysis plan (SAP)

  • SAP written following the ICH E9 structure.
  • Definition of the analysis populations: intention-to-treat and per-protocol.
  • Strategy for handling missing data and adjusting for multiplicity.

Efficacy and safety analysis

  • Mixed-effects models for longitudinal data with repeated measures.
  • Analysis of pre-specified subgroups, interpreted with caution.
  • Interim analyses and stopping rules when the design includes them.

Robustness and reproducibility

  • Multiple imputation and sensitivity analyses under different missing-data assumptions.
  • Reproducible, version-controlled code, with a traceable analysis.
  • Results and figures in the format required by the target journal or report.

What it is for

  • Give the trial a defensible statistical foundation, set at the design stage and rebuilt with rigour when the analysis starts after the data have been collected.
  • Reach the final analysis with a pre-specified plan that upholds the validity of the conclusions in front of reviewers and oversight committees.
  • Turn the trial data into interpreted, publishable evidence, with a rigorously written methods section.
Why choose this service

The earlier the biostatistician comes in, the better the trial. But it's never too late to come in

Sample size, analysis populations and the multiplicity strategy pay off most when they are set in the protocol. But if you come to us with the data already collected, it is not too late. A well-grounded analysis plan, sound handling of missing data and the right sensitivity analyses make the difference between a manuscript that gets through peer review and one that does not.

The statistical plan comes before the data

We write the SAP following the ICH E9 structure before the study starts: analysis populations, endpoints, missing-data handling and multiplicity adjustment, all set in advance. And if the trial is already under way or closed, we set that plan before touching the data, which is what protects the validity of the primary analysis.

A sample size that stands up to review

A sample size calculation is not a number: it is an argument. We size the study from the clinically relevant effect, the desired power and realistic dropout rates, and document it so that the funding committee or the reviewers see the reasoning, not just the result.

Methods matched to the actual design

A cluster-randomised trial is not analysed like a parallel one, and repeated measures are not treated like cross-sectional data. We apply mixed-effects models, intention-to-treat and per-protocol analyses, and multiple imputation as the structure of your data requires.

Results ready to publish

We deliver the interpreted results, the figures in your target journal's format and the written methods section. If reviewers question a methodological decision, we prepare the technical argument and the sensitivity analyses they expect to see.

Our process

What working with us looks like

We apply our D²I (Data to Insights) methodology to every service. A structured, iterative and transparent process that turns complex data into actionable knowledge.

01

Kick-off and problem definition

We meet with you to understand the clinical problem, the data available and the objectives of the project. We agree on deliverables, timelines and communication channels, and we sign whatever confidentiality agreements you need to protect your data.

02

Data review and preparation

We assess the quality of your data, identify inconsistencies and limitations, and structure the data for analysis. If critical information is missing, we tell you before going any further. We document every cleaning decision so that the process is traceable and reproducible. In a trial, this includes checking the integrity of the randomisation, the definition of the analysis populations, the structure of the missing data and the consistency between the data collected and the endpoint specified in the protocol.

03

Analysis and modelling

We apply the statistical methodology that fits your questions. We work iteratively: we share preliminary results with you, discuss the findings and adjust the approach where needed. We do not work in the dark until the final delivery. For this service, we run the pre-specified primary analysis, apply the models suited to the design and support the conclusions with sensitivity analyses that anticipate the objections of reviewers and committees.

04

Communicating results

We turn the findings into the format you need: a technical report, tables and figures for publication, an interactive dashboard or an executive presentation. We always include the clinical interpretation, not just the figures.

05

Impact review session

30 days after delivery we meet with you again for a 60-minute strategy session. By then you have had time to present the results internally, the real implementation questions have come up and you can assess the impact of the work with some perspective. We answer your questions, adjust interpretations where necessary and agree together on the way forward.

This is our general process. If you want to understand how we apply it technically to each type of analysis, see our full D²I methodology.

Have a data project on your hands?

Tell us about your case and we will work out together how to approach it.

Book a session
FAQs

Frequently asked questions

Can I commission the statistical analysis if the trial is already under way or the data have already been collected?

Yes. Biostatistical support pays off most when it comes in at the protocol stage, but arriving with the data already collected does not rule out a defensible analysis, as long as it is made explicit which decisions were specified in advance, which are set before analysing and which part should be interpreted as exploratory. This applies both to a trial that has not yet started, where the study is sized and the analysis plan written before recruitment, and to one that has closed, where the analysis plan is set before touching the data. What protects the validity of the primary analysis is pre-specifying the strategy before looking at the results, not having been involved from day one. If the results have already been explored, that must be documented and kept separate from the primary analysis that can be defended as pre-specified. When the trial arrives with the data collected, the work centres on a well-grounded plan, sound handling of missing data and the right sensitivity analyses.

What exactly does biostatistical support for a trial include, from start to finish?

The service covers the statistical cycle of the trial within the academic, pragmatic or implementation setting: sample size calculation, writing the statistical analysis plan (SAP), analysing the efficacy and safety endpoints, and preparing the results for publication or the end-of-study report. The client designs the intervention, runs the trial and collects the data; the service sizes, specifies, analyses and interprets. It does not include patient recruitment, clinical monitoring or the operational management of the trial, which belong to the research team or a CRO. What you receive is the statistical foundation of the study, from the sample size argument to the written methods section, plus the sensitivity analyses that help answer methodological objections from reviewers and committees.

How do you justify a clinical trial's sample size so that it stands up to review?

The sample size is justified from the clinically relevant effect, the desired statistical power and the expected dropout rates, not as an isolated number but as a documented argument. This applies at the design stage, before recruitment, and it determines the statistical feasibility of the whole study. The calculation starts from the effect size the trial must be able to detect, set on clinical rather than statistical grounds, and is adjusted to the specific design: parallel, factorial or cluster-randomised, each of which calls for different considerations. Depending on the design, the significance level, the allocation between groups, the intracluster correlation or the longitudinal structure may also come into play. The full reasoning is documented so that a funding committee or a reviewer can see how the figure was reached. A sample size without its justification is the first decision a reviewer questions.

What is a statistical analysis plan (SAP), and why should it be set before seeing the data?

The statistical analysis plan (SAP) is the document that defines, before any analysis, a trial's analysis populations, endpoints, missing-data strategy and multiplicity adjustment. It is worth setting before seeing the data because pre-specification is one of the conditions that separate a confirmatory analysis from an exploratory one: choosing the method after the results are known opens the door to picking, consciously or not, the option that gives the desired result. The SAP is written following the ICH E9 structure as its methodological reference, including, where relevant, the intention-to-treat and per-protocol populations. In a trial that has already closed, setting the SAP before touching the data protects the validity of the primary analysis just the same.

My trial is pragmatic and has repeated measures. Is it analysed the same way as a classic parallel trial?

No. The method is adapted to the actual design of the study and to the structure of the data, not to a default template. A cluster-randomised trial is not analysed like a parallel one, because ignoring the correlation within clusters underestimates the uncertainty; repeated measures are not treated like cross-sectional data, because observations from the same patient are not independent. For these cases the options include mixed-effects models for longitudinal data, intention-to-treat and per-protocol analyses, and multiple imputation when the missing-data structure requires it, among others depending on the endpoint and the design. Pragmatic and implementation trials, with the variability of real-world settings, are precisely where a generic template can produce inferences that are hard to defend, and where fitting the analysis to the specific design matters most.

How are missing data and sensitivity analyses handled?

Missing data are handled with a strategy defined in the SAP and backed by sensitivity analyses under different assumptions. This applies to most trials in practice, where dropout, missed visits or loss to follow-up have to be anticipated in the SAP. The strategy starts by characterising the plausible missing-data mechanism and choosing the method consistent with that assumption: multiple imputation is common, but it is not the only route. The key piece is the sensitivity analysis, which checks whether the conclusions hold under alternative assumptions about the missing data. If the result only holds under the most favourable assumption, that fragility needs to be known before peer review, not discovered during it. This is what makes it possible to tell a stable conclusion from one that depends too heavily on a favourable assumption.

How does biostatistics for clinical trials differ from study design and statistical protocols?

Biostatistics for academic and pragmatic clinical trials covers the statistical cycle specific to the trial, including the analysis of the data once collected, and can include design decisions when the project comes in from the start. Study design and statistical protocols apply before data are collected, when the decision is how to set up the study: type of design, hypotheses, variables, measurement plan. They can be two phases of the same project or two different entry points: if you have not started the study yet, you mainly need design; if your trial is already under way or closed, you need the analysis plan and the analysis itself. They do not answer the same question: one helps you set up the study properly; the other helps you analyse it and defend it rigorously.

Does biostatistics for academic and pragmatic clinical trials prepare the statistical documentation for a regulatory submission to the EMA or the FDA?

No. The service works with academic, pragmatic and implementation clinical trials, and prepares the statistical evidence for scientific publication, end-of-study reports and its defence in front of reviewers and funding or oversight committees. It does not cover preparing or managing a formal regulatory submission to agencies such as the EMA or the FDA, nor producing datasets and documentation to agency standards (CDISC, SDTM/ADaM), nor the tables, listings and figures (TLFs) required in a regulatory dossier. That is a different regulatory competence, with its own framework, and it lies outside ADI's scope. The reference to the ICH E9 structure in the analysis plan is good methodological practice in academic and pragmatic research, not a capability for submission to an agency. The line does not blur: academic and pragmatic trials, yes; a formal regulatory dossier, no.

Shall we talk?

Tell us what you are working on and we will give you a straight answer on how we can help.